Miyakogusa Predicted Gene

Lj2g3v0878960.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JMN9_SOYBN 1001 90.5 94.4 (tr|I1JMN9) Lysine--tRNA ligase OS=Glycine max PE=3 SV=1
TAIR_pep AT3G13490.1 869 79.3 89.8 | Symbols: OVA5, ATKRS-2 | Lysyl-tRNA synthetase, class II | chr3:4395984-4399302 REVERSE LENGTH=602
Medicago Medtr8g007295.1 1008 90.7 95.3 | lysyl-tRNA synthetase (class II) | HC | chr8:1432639-1441877 | 20130731
Soybean Glyma03g25750.1 1001 90.5 94.4  
LJGI gnl|LJGI|TC61051 1415 100.0 100.0 similar to UniRef100_A7P095 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (32%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0878960.1 length: 590 aa.
IPR002313 Lysine-tRNA ligase, class II
method AccNumber shortName E-value location
Molecular Function GO:0004824 lysine-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006430 lysyl-tRNA aminoacylation    
HAMAP MF_00252 Lys_tRNA_synth_class2 41.594 77-589
HMMPanther PTHR22594:SF4 LYSYL-TRNA 6.5e-230 6-587
HMMTigr TIGR00499 lysS_bact: 1.3e-186 75-587
IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N)
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPfam PF00152 tRNA-synt_2 9.6e-87 221-585
IPR004365 Nucleic acid binding, OB-fold, tRNA/helicase-type
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF01336 tRNA_anti 2.3e-17 126-201
IPR006195 Aminoacyl-tRNA synthetase, class II
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
ProfileScan PS50862 AA_TRNA_LIGASE_II 27.040 242-584
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 1.4e-42 74-212
superfamily SSF50249 Nucleic 3.8e-43 68-212
IPR018149 Lysyl-tRNA synthetase, class II, C-terminal
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004824 lysine-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006430 lysyl-tRNA aminoacylation    
FPrintScan PR00982 TRNASYNTHLYS 1.1e-37 257-267
273-289
302-315
320-337
453-469
IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPanther PTHR22594 ASPARTYL/LYSYL-TRNA 6.5e-230 6-587
no_ID  
Coil coil coiled-coil NA 504-525
Gene3D G3DSA:3.30.930.10 no description 3.4e-112 215-584
Seg seg seg NA 19-52
59-69
superfamily SSF55681 Class 1.1e-105 220-588
Wolf-PSORT
Lj2g3v0878960.1	chlo 11.5, chlo_mito 7.5, mito 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0878960.1