Miyakogusa Predicted Gene

Lj2g3v0878950.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B2G3G6_CANEN 1062 83.6 92.6 (tr|B2G3G6) Arginyl-tRNA synthetase OS=Canavalia ensiformis GN=argS PE=2 SV=1
TAIR_pep AT4G26300.1 885 70.1 84.4 | Symbols: emb1027 | Arginyl-tRNA synthetase, class Ic | chr4:13308400-13313109 REVERSE LENGTH=642
Medicago Medtr1g106040.1 1062 84.6 92.5 | cytoplasmic-like arginine-tRNA ligase | HC | chr1:47979152-47971192 | 20130731
Soybean Glyma01g00940.1 1056 82.8 92.3  
LJGI gnl|LJGI|TC57751 1415 100.0 100.0 similar to UniRef100_O23246 Cluster: Arginyl-tRNA synthetase; n=1; Arabidopsis thaliana|Rep: Arginyl-tRNA synthetase - Arabidopsis thaliana (Mouse-ear cress), partial (33%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0878950.1 length: 596 aa.
IPR001278 Arginine-tRNA ligase, class Ia
method AccNumber shortName E-value location
Molecular Function GO:0004814 arginine-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006420 arginyl-tRNA aminoacylation    
HAMAP MF_00123 Arg_tRNA_synth 22.489 13-596
HMMPanther PTHR11956 ARGINYL-TRNA 3.4e-245 6-596
HMMTigr TIGR00456 argS: 9.8e-128 27-595
IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
PatternScan PS00178 AA_TRNA_LIGASE_I NA 142-153
IPR005148 Arginyl tRNA synthetase N-terminal domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004814 arginine-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006420 arginyl-tRNA aminoacylation    
Gene3D G3DSA:3.30.1360.70 no description 9.7e-27 9-122
HMMPfam PF03485 Arg_tRNA_synt_N 6.1e-16 14-106
HMMSmart SM01016 Arginyl 7e-18 13-106
superfamily SSF55190 Arginyl-tRNA 3.7e-16 9-122
IPR008909 DALR anticodon binding
Molecular Function GO:0004814 arginine-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006420 arginyl-tRNA aminoacylation    
HMMPfam PF05746 DALR_1 4.9e-30 480-595
HMMSmart SM00836 DALR 6e-29 480-596
IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
superfamily SSF47323 Anticodon-binding 6.9e-34 474-596
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
Gene3D G3DSA:3.40.50.620 no description 2.3e-99 133-471
IPR015945 Arginyl-tRNA synthetase, class Ia, core
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004814 arginine-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006420 arginyl-tRNA aminoacylation    
FPrintScan PR01038 TRNASYNTHARG 2.1e-20 134-149
149-165
317-338
HMMPfam PF00750 tRNA-synt_1d 2.1e-94 131-466
no_ID  
Gene3D G3DSA:1.10.730.10 no description 3.1e-33 474-595
superfamily SSF52374 Nucleotidylyl 2.4e-77 126-474
Wolf-PSORT
Lj2g3v0878950.1	chlo 6, cyto 6, nucl 1, mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0878950.1