Miyakogusa Predicted Gene

Lj2g3v0852080.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1J4I5_SOYBN 987 70.7 77.5 (tr|I1J4I5) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G25930.1 536 43.7 59.5 | Symbols: | Protein kinase family protein with leucine-rich repeat domain | chr5:9050880-9053978 FORWARD LENGTH=1005
Medicago Medtr6g088790.1 899 65.2 75.8 | leucine-rich receptor-like kinase family protein | HC | chr6:33914311-33918151 | 20130731
Soybean Glyma01g01080.1 980 72.2 79.0  
LJGI gnl|LJGI|TC66200 1435 99.9 99.9 weakly similar to UniRef100_A7PSI1 Cluster: Chromosome chr6 scaffold_28, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_28, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0852080.1 length: 748 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.13 125-146
149-171
586-608
ProfileScan PS51450 LRR 5.995 125-147
149-171
247-270
271-293
294-317
318-340
460-482
539-561
515-536
563-585
586-608
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 58 147-171
245-269
316-340
513-537
584-607
IPR025875 Leucine rich repeat 4
HMMPfam PF12799 LRR_4 6.2e-07 294-330
no_ID  
FPrintScan PR00019 LEURICHRPT 1.8e-05 295-308
561-574
Gene3D G3DSA:3.80.10.10 no description 5.5e-20 37-288
294-507
508-608
HMMPanther PTHR24420 FAMILY 5.3e-182 82-716
HMMPanther PTHR24420:SF397SUBFAMILY NOT 5.3e-182 82-716
HMMPfam PF13516 LRR_6 0.049 538-560
Seg seg seg NA 14-24
146-155
212-225
503-521
653-666
superfamily SSF52047 RNI-like 2.5e-59 308-609
superfamily SSF52058 L 9.8e-55 32-293
Wolf-PSORT
Lj2g3v0852080.1	extr 4, vacu 4, plas 3, golg 2, E.R._plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0852080.1