Miyakogusa Predicted Gene
- Lj2g3v0835870.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1J804_SOYBN |
550 |
68.9 |
75.7 |
(tr|I1J804) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G28890.1 |
295 |
42.7 |
56.7 |
| Symbols: | RING/U-box superfamily protein | chr4:14256437-14257735 REVERSE LENGTH=432 |
| Medicago |
Medtr6g087150.1 |
419 |
55.6 |
66.2 |
| RING-H2 finger protein ATL4J | HC | chr6:33511896-33513722 | 20130731 |
| Soybean |
Glyma01g34830.1 |
550 |
68.9 |
75.7 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v0835870.1 |
length: 416 aa. |
| IPR001841 |
Zinc finger, RING-type |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| HMMPfam |
PF13639 |
zf-RING_2 |
8.2e-15 |
115-159 |
| HMMSmart |
SM00184 |
Ring |
6.7e-07 |
116-157 |
| ProfileScan |
PS50089 |
ZF_RING_2 |
12.637 |
116-158 |
| IPR013083 |
Zinc finger, RING/FYVE/PHD-type |
| Gene3D |
G3DSA:3.30.40.10 |
no description |
3.7e-19 |
111-161 |
| no_ID |
|
| HMMPanther |
PTHR14155 |
RING |
1.8e-44 |
1-185 |
| Seg |
seg |
seg |
NA |
204-217 |
| superfamily |
SSF57850 |
RING/U-box |
4.6e-21 |
89-164 |
- Wolf-PSORT
Lj2g3v0835870.1 plas 5, nucl 3, vacu 3, golg_plas 3, E.R._plas 3, mito_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v0835870.1 |
|