Miyakogusa Predicted Gene

Lj2g3v0813080.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SR86_LOTJA 437 100.0 100.0 (tr|I3SR86) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G28950.1 393 90.5 93.8 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | RHO-related protein from plants 9 | chr4:14278289-14279705 FORWARD LENGTH=209
Medicago Medtr6g087980.1 421 97.1 97.1 | Rho-like GTP-binding protein | HC | chr6:33118043-33114412 | 20130731
Soybean Glyma07g09250.1 425 96.7 98.1  
LJGI gnl|LJGI|TC63969 1239 99.7 99.7 homologue to UniRef100_A7UQU4 Cluster: ROP-like protein; n=1; Medicago truncatula|Rep: ROP-like protein - Medicago truncatula (Barrel medic), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0813080.1 length: 210 aa.
IPR001806 Small GTPase superfamily
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
FPrintScan PR00449 RASTRNSFRMNG 2.3e-37 8-29
31-47
48-70
110-123
156-178
HMMPfam PF00071 Ras 1.2e-52 9-179
IPR003578 Small GTPase superfamily, Rho type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00174 Rho 1.8e-109 10-181
ProfileScan PS51420 RHO 24.677 1-178
IPR003579 Small GTPase superfamily, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 1.8e-24 8-181
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 3e-31 6-173
IPR020849 Small GTPase superfamily, Ras type
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0007165 signal transduction    
Cellular Component GO:0016020 membrane    
HMMSmart SM00173 Ras 1.8e-22 5-181
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 5.3e-54 3-186
no_ID  
Gene3D G3DSA:3.40.50.300 no description 2.4e-62 4-195
HMMPanther PTHR24072 FAMILY 4.2e-156 1-199
HMMPanther PTHR24072:SF66 SUBFAMILY 4.2e-156 1-199
Wolf-PSORT
Lj2g3v0813080.1	plas 5, cyto 3, golg_plas 3, nucl 2.5, E.R._plas 2.5, mito_plas 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0813080.1