Miyakogusa Predicted Gene

Lj2g3v0725300.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KN36_MEDTR 1324 80.7 86.3 (tr|G7KN36) Plant synaptotagmin OS=Medicago truncatula GN=MTR_6g084400 PE=4 SV=1
TAIR_pep AT3G18370.1 859 54.6 70.8 | Symbols: SYTF, ATSYTF, NTMC2TYPE3, NTMC2T3 | C2 domain-containing protein | chr3:6306362-6310256 FORWARD LENGTH=815
Medicago Medtr6g084400.1 1324 80.7 86.3 | plant synaptotagmin | HC | chr6:31578270-31585887 | 20130731
Soybean Glyma07g10280.1 1305 80.2 86.0  
LJGI gnl|LJGI|GO025537 1348 99.4 99.4 similar to UniRef100_A7PGU5 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0725300.1 length: 814 aa.
IPR000008 C2 calcium-dependent membrane targeting
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00168 C2 2.7e-16 297-371
477-554
606-681
HMMSmart SM00239 Protein 4.7e-15 294-401
476-570
603-697
IPR008973 C2 calcium/lipid-binding domain, CaLB
Molecular Function GO:0005515 protein binding    
superfamily SSF49562 C2 2e-07 597-713
470-591
293-395
IPR018029 C2 membrane targeting protein
ProfileScan PS50004 C2 12.943 476-555
604-682
no_ID  
Gene3D G3DSA:2.60.40.150 no description 1.1e-26 294-395
476-587
604-713
HMMPanther PTHR10774 EXTENDED 2.6e-24 98-712
Seg seg seg NA 185-196
458-469
634-644
757-775
802-814
Wolf-PSORT
Lj2g3v0725300.1	chlo 5, nucl 3.5, chlo_mito 3.5, cysk_nucl 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0725300.1