Miyakogusa Predicted Gene

Lj2g3v0720160.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr2

Full length sequence(43247325 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1L4B4_SOYBN 226 55.0 62.7 (tr|I1L4B4) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT3G18300.1 66.2 31.0 45.5 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48780.1); Has 69 Blast hits to 69 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:6283396-6284220 FORWARD LENGTH=274

Medicago Medtr6g083930.1 183 47.4 54.7 | hypothetical protein | HC | chr6:31329301-31327995 | 20130731

Soybean Glyma09g31530.1 226 55.0 62.7

LJGI gnl|LJGI|GO031229 1005 99.8 99.8 similar to UniRef100_A7PGV9 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (33%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj2g3v0720160.1 length: 239 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 43-58
89-101
164-190

Wolf-PSORT

Lj2g3v0720160.1 nucl 8, chlo 3, cyto 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj2g3v0720160.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1L4B4_SOYBN	226	55.0	62.7	(tr\|I1L4B4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT3G18300.1	66.2	31.0	45.5	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48780.1); Has 69 Blast hits to 69 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr3:6283396-6284220 FORWARD LENGTH=274
Medicago	Medtr6g083930.1	183	47.4	54.7	\| hypothetical protein \| HC \| chr6:31329301-31327995 \| 20130731
Soybean	Glyma09g31530.1	226	55.0	62.7
LJGI	gnl\|LJGI\|GO031229	1005	99.8	99.8	similar to UniRef100_A7PGV9 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (33%)

no_ID
Lj2g3v0720160.1				length: 239 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	43-58 89-101 164-190