Miyakogusa Predicted Gene

Lj2g3v0690060.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KRF4_SOYBN 1332 88.0 95.0 (tr|K7KRF4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G02750.1 1088 69.3 84.4 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:1221116-1223461 REVERSE LENGTH=781
Medicago Medtr8g106950.1 1315 86.8 93.4 | pentatricopeptide (PPR) repeat protein | HC | chr8:45164389-45168068 | 20130731
Soybean Glyma05g34000.1 1277 87.7 94.9  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0690060.1 length: 707 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.00034 22-51
53-82
84-111
115-138
208-237
271-300
301-330
475-498
HMMPfam PF12854 PPR_1 9.3e-07 174-201
HMMPfam PF13041 PPR_2 3.4e-12 399-447
HMMPfam PF13812 PPR_3 0.0069 146-172
239-269
HMMTigr TIGR00756 PPR: 9.2e-07 22-52
53-83
84-110
115-138
146-177
177-201
208-236
239-269
271-301
301-334
402-436
ProfileScan PS51375 PPR 7.728 82-116
20-54
1-19
55-81
206-240
175-205
144-174
117-143
268-302
241-267
303-333
334-368
400-434
369-399
471-501
435-465
537-571
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 3.8e-11 177-325
no_ID  
HMMPanther PTHR24015 FAMILY 0 1-707
HMMPanther PTHR24015:SF125SUBFAMILY NOT 0 1-707
HMMPfam PF14432 DYW_deaminase 9.5e-19 585-697
superfamily SSF48452 TPR-like 0.0018 99-235
273-563
Wolf-PSORT
Lj2g3v0690060.1	mito 9, chlo 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0690060.1