Miyakogusa Predicted Gene

Lj2g3v0676890.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KQK0_SOYBN 345 88.0 93.8 (tr|I1KQK0) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G73640.1 274 70.2 85.1 | Symbols: AtRABA6a, RABA6a | RAB GTPase homolog A6A | chr1:27687033-27687987 FORWARD LENGTH=233
Medicago Medtr6g079550.1 317 81.3 88.8 | RAB GTPase-like protein A1D | HC | chr6:30013567-30009535 | 20130731
Soybean Glyma08g05800.1 345 88.0 93.8  
LJGI gnl|LJGI|TC73675 944 100.0 100.0 similar to UniRef100_Q6ZXT1 Cluster: Small GTPase; n=1; Medicago sativa|Rep: Small GTPase - Medicago sativa (Alfalfa), partial (83%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0676890.1 length: 192 aa.
IPR001806 Small GTPase superfamily
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
FPrintScan PR00449 RASTRNSFRMNG 5.8e-37 14-35
37-53
55-77
117-130
152-174
HMMPfam PF00071 Ras 4.1e-57 15-175
IPR002041 Ran GTPase
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0006913 nucleocytoplasmic transport    
Biological Process GO:0007165 signal transduction    
HMMSmart SM00176 Ran 1.9e-05 19-192
IPR003578 Small GTPase superfamily, Rho type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00174 Rho 2.3e-10 16-177
IPR003579 Small GTPase superfamily, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 1.9e-95 14-177
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 5e-30 13-167
IPR020849 Small GTPase superfamily, Ras type
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0007165 signal transduction    
Cellular Component GO:0016020 membrane    
HMMSmart SM00173 Ras 2e-17 11-177
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 9e-61 9-174
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.4e-64 7-183
HMMPanther PTHR24073 FAMILY 6.4e-96 7-192
HMMPanther PTHR24073:SF87 SUBFAMILY 6.4e-96 7-192
ProfileScan PS51419 RAB 32.168 9-192
Wolf-PSORT
Lj2g3v0676890.1	cyto 6, nucl 4, chlo 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0676890.1