Miyakogusa Predicted Gene

Lj2g3v0674850.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7LE58_MEDTR 882 72.9 83.0 (tr|G7LE58) Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Medicago truncatula GN=MTR_8g107280 PE=4 SV=1
TAIR_pep AT3G17970.1 695 60.0 73.6 | Symbols: atToc64-III, TOC64-III | translocon at the outer membrane of chloroplasts 64-III | chr3:6148030-6151794 FORWARD LENGTH=589
Medicago Medtr8g107280.1 882 72.9 83.0 | translocon at the outer membrane ofs-like protein | HC | chr8:45327392-45334135 | 20130731
Soybean Glyma05g33810.1 842 71.6 82.5  
LJGI gnl|LJGI|TC61405 900 100.0 100.0 similar to UniRef100_A7PH66 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (35%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0674850.1 length: 580 aa.
IPR000120 Amidase
method AccNumber shortName E-value location
Molecular Function GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor    
HMMPanther PTHR11895 AMIDASE 8.2e-187 51-465
HMMPfam PF01425 Amidase 9.9e-57 55-442
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 9.9e-34 471-579
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 22.566 475-576
IPR013105 Tetratricopeptide TPR2
HMMPfam PF07719 TPR_2 1.3e-05 544-576
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 0.00049 475-508
509-542
543-576
ProfileScan PS50005 TPR 11.092 475-508
509-542
543-576
IPR023631 Amidase signature domain
Gene3D G3DSA:3.90.1300.10 no description 1.2e-76 53-448
superfamily SSF75304 Amidase 3.8e-72 8-453
no_ID  
HMMPanther PTHR11895:SF6 AMIDASE 8.2e-187 51-465
HMMPfam PF13414 TPR_11 2.8e-18 474-540
Seg seg seg NA 40-59
136-154
400-410
superfamily SSF48452 TPR-like 1.1e-29 466-579
Wolf-PSORT
Lj2g3v0674850.1	chlo 9, nucl 2, extr 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0674850.1 Not targeted -48.652 -0.880 -3.131 71.94% -44.641