Miyakogusa Predicted Gene

Lj2g3v0661330.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KRE8_SOYBN 1377 70.7 78.8 (tr|K7KRE8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G48540.1 733 43.9 59.8 | Symbols: | Outer arm dynein light chain 1 protein | chr1:17945540-17950405 FORWARD LENGTH=1063
Medicago Medtr8g107440.1 1318 69.4 77.1 | outer arm dynein light chain 1 | HC | chr8:45414531-45424768 | 20130731
Soybean Glyma08g05990.1 1366 71.1 79.3  
LJGI gnl|LJGI|TC65052 1144 99.8 99.8 similar to UniRef100_A7PH98 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0661330.1 length: 978 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
ProfileScan PS51450 LRR 4.878 193-214
215-236
240-261
262-283
287-308
IPR025875 Leucine rich repeat 4
HMMPfam PF12799 LRR_4 3.5e-07 194-232
no_ID  
Coil coil coiled-coil NA 405-426
Gene3D G3DSA:3.80.10.10 no description 4.5e-31 159-327
HMMPanther PTHR15454 NISCHARIN 1.7e-202 5-955
HMMPanther PTHR15454:SF7 SUBFAMILY 1.7e-202 5-955
HMMPfam PF13855 LRR_8 4.1e-07 242-298
HMMSmart SM00365 Leucine-rich 4.4 191-212
213-234
260-281
Seg seg seg NA 44-59
84-101
519-533
544-555
621-635
733-744
superfamily SSF52058 L 3e-32 175-331
Wolf-PSORT
Lj2g3v0661330.1	nucl 8, cyto 3, mito 1, plas 1, cysk 1, cysk_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0661330.1