Miyakogusa Predicted Gene

Lj2g3v0636940.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L425_SOYBN 889 84.6 91.8 (tr|I1L425) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G05600.2 594 58.1 76.2 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:1672161-1673675 FORWARD LENGTH=504
Medicago Medtr5g048070.1 871 81.5 90.4 | PPR containing plant-like protein | HC | chr5:21053107-21055317 | 20130731
Soybean Glyma09g30270.1 892 84.5 91.8  
LJGI gnl|LJGI|GO024040 153 86.5 86.5 similar to UniRef100_A7R8D4 Cluster: Chromosome undetermined scaffold_2463, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_2463, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0636940.1 length: 502 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.00055 48-76
85-111
226-256
298-327
405-429
440-468
HMMPfam PF13041 PPR_2 1.1e-10 151-198
HMMTigr TIGR00756 PPR: 0.00028 47-78
154-185
188-212
226-257
405-430
440-471
ProfileScan PS51375 PPR 6.303 44-78
79-113
150-184
185-215
224-258
295-329
259-294
330-365
402-436
366-396
437-471
472-502
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 3.7e-08 366-498
no_ID  
HMMPanther PTHR24015 FAMILY 5.4e-83 6-500
HMMPanther PTHR24015:SF0 SUBFAMILY 5.4e-83 6-500
Wolf-PSORT
Lj2g3v0636940.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0636940.1