Miyakogusa Predicted Gene

Lj2g3v0636420.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JLB0_SOYBN 1231 60.6 72.6 (tr|I1JLB0) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G47890.1 441 35.9 52.4 | Symbols: AtRLP7, RLP7 | receptor like protein 7 | chr1:17643976-17647035 FORWARD LENGTH=1019
Medicago Medtr4g017700.1 1217 60.5 72.3 | verticillium wilt resistance-like protein | LC | chr4:5560232-5557050 | 20130731
Soybean Glyma03g07240.1 1103 62.0 73.6  
LJGI gnl|LJGI|BP056473 252 87.6 87.6 similar to UniRef100_Q0I4F7 Cluster: Sulfate transporter; n=1; Haemophilus somnus 129PT|Rep: Sulfate transporter - Haemophilus, partial (2%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0636420.1 length: 1054 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.76 125-147
685-702
878-897
ProfileScan PS51450 LRR 6.049 125-147
101-122
352-373
328-351
375-396
400-422
424-445
448-470
472-493
494-515
517-538
540-561
563-585
589-610
659-680
684-706
732-744
875-897
899-922
923-945
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 1.7e+02 99-122
123-147
326-349
350-372
398-422
492-515
897-920
921-944
IPR013210 Leucine-rich repeat-containing N-terminal, type 2
HMMPfam PF08263 LRRNT_2 6.1e-09 31-71
no_ID  
FPrintScan PR00019 LEURICHRPT 1.1e-05 353-366
897-910
Gene3D G3DSA:3.80.10.10 no description 3.1e-22 30-180
181-436
452-595
596-797
849-956
HMMPanther PTHR24420 FAMILY 2.3e-151 80-968
HMMPanther PTHR24420:SF480SUBFAMILY NOT 2.3e-151 80-968
HMMPfam PF13516 LRR_6 0.032 897-919
HMMPfam PF13855 LRR_8 1.3e-06 304-363
375-434
516-574
709-766
HMMSmart SM00365 Leucine-rich 66 123-149
373-400
422-443
730-756
897-918
Seg seg seg NA 37-41
443-458
557-568
875-887
966-977
superfamily SSF52047 RNI-like 7.1e-54 303-576
superfamily SSF52058 L 2.1e-38 578-960
53-292
Wolf-PSORT
Lj2g3v0636420.1	plas 3, extr 3, E.R. 3, E.R._plas 3, chlo 2, vacu 2, nucl_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0636420.1