Miyakogusa Predicted Gene
- Lj2g3v0635150.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7INY1_MEDTR |
235 |
66.9 |
81.4 |
(tr|G7INY1) Disease resistance-like protein GS4-5 OS=Medicago truncatula GN=MTR_2g012770 PE=4 SV=1 |
| TAIR_pep |
AT1G72900.1 |
149 |
47.8 |
62.3 |
| Symbols: | Toll-Interleukin-Resistance (TIR) domain-containing protein | chr1:27432216-27433532 FORWARD LENGTH=363 |
| Medicago |
Medtr2g012770.1 |
234 |
66.9 |
81.4 |
| disease resistance protein (TIR-NBS-LRR class) | LC | chr2:3279450-3282736 | 20130731 |
| Soybean |
Glyma16g33680.1 |
233 |
67.7 |
84.5 |
|
| LJGI |
gnl|LJGI|FS318368 |
1059 |
100.0 |
100.0 |
similar to UniRef100_Q84ZV8 Cluster: R 3 protein; n=2; Glycine max|Rep: R 3 protein - Glycine max (Soybean), partial (15%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v0635150.1 |
length: 178 aa. |
| IPR000157 |
Toll/interleukin-1 receptor homology (TIR) domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| Biological Process |
GO:0007165 |
signal transduction |
|
|
| HMMPfam |
PF01582 |
TIR |
5.7e-36 |
19-159 |
| HMMSmart |
SM00255 |
Toll |
3.4e-44 |
16-164 |
| ProfileScan |
PS50104 |
TIR |
29.772 |
15-164 |
| superfamily |
SSF52200 |
Toll/Interleukin |
3.8e-42 |
5-167 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.10140 |
no description |
5.6e-24 |
13-138 |
| HMMPanther |
PTHR11017 |
LEUCINE-RICH |
4.3e-51 |
9-170 |
| HMMPanther |
PTHR11017:SF130DISEASE |
RESISTANCE |
4.3e-51 |
9-170 |
- Wolf-PSORT
Lj2g3v0635150.1 nucl 10, chlo 2, extr 1, vacu 1, chlo_mito 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v0635150.1 |
|