Miyakogusa Predicted Gene

Lj2g3v0632420.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MQM3_SOYBN 1174 75.9 85.4 (tr|I1MQM3) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G20230.1 845 54.6 73.0 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:7009570-7011852 FORWARD LENGTH=760
Medicago Medtr6g075280.1 1041 81.7 90.7 | pentatricopeptide (PPR) repeat protein | HC | chr6:27881892-27885186 | 20130731
Soybean Glyma16g34430.1 1176 76.2 85.6  
LJGI gnl|LJGI|FS354499 170 91.8 91.8 weakly similar to UniRef100_A7NVM6 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0632420.1 length: 749 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.59 310-334
416-439
517-540
586-611
HMMPfam PF13041 PPR_2 1.2e-12 170-217
341-387
441-488
HMMPfam PF13812 PPR_3 0.01 71-103
HMMTigr TIGR00756 PPR: 0.00013 72-104
172-205
207-240
310-341
343-377
444-477
479-510
ProfileScan PS51375 PPR 8.364 69-103
170-204
139-169
205-239
341-375
306-340
275-305
442-476
411-441
477-512
513-543
579-613
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00014 413-533
no_ID  
HMMPanther PTHR24015 FAMILY 0 59-749
HMMPanther PTHR24015:SF157SUBFAMILY NOT 0 59-749
HMMPfam PF14432 DYW_deaminase 1.8e-18 616-739
Seg seg seg NA 52-75
134-147
Wolf-PSORT
Lj2g3v0632420.1	chlo 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0632420.1