Miyakogusa Predicted Gene

Lj2g3v0609720.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7AFQ1_PHLPR 555 92.5 96.9 (tr|K7AFQ1) Uncharacterized protein (Fragment) OS=Phleum pratense PE=2 SV=1
TAIR_pep AT5G23250.1 539 89.3 93.3 | Symbols: | Succinyl-CoA ligase, alpha subunit | chr5:7830460-7832491 FORWARD LENGTH=341
Medicago Medtr6g077820.1 546 89.3 93.7 | succinyl-CoA ligase [ADP-forming] subunit alpha-2 | HC | chr6:29221006-29215746 | 20130731
Soybean Glyma16g33870.1 546 92.1 96.5  
LJGI gnl|LJGI|TC71866 1885 100.0 100.0 homologue to UniRef100_A7QEL5 Cluster: Chromosome chr17 scaffold_85, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_85, whole genome shotgun sequence - Vitis vinifera (Grape), partial (90%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0609720.1 length: 317 aa.
IPR003781 CoA-binding
method AccNumber shortName E-value location
Molecular Function GO:0048037 cofactor binding    
HMMPfam PF02629 CoA_binding 1.5e-31 35-128
HMMSmart SM00881 CoA 6.9e-36 33-129
IPR005810 Succinyl-CoA ligase, alpha subunit
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
FPrintScan PR01798 SCOASYNTHASE 6.2e-39 111-128
207-225
238-251
271-288
HMMPIR PIRSF001553 Succinyl-CoA 6.7e-193 12-317
HMMTigr TIGR01019 sucCoAalpha: 3.3e-140 33-315
PatternScan PS01216 SUCCINYL_COA_LIG_1 NA 182-211
IPR005811 ATP-citrate lyase/succinyl-CoA ligase
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF00549 Ligase_CoA 8.6e-23 181-302
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 1.6e-58 32-148
IPR016102 Succinyl-CoA synthetase-like
Gene3D G3DSA:3.40.50.261 no description 7.9e-80 149-316
superfamily SSF52210 Succinyl-CoA 1.7e-62 153-317
IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0003878 ATP citrate synthase activity    
Molecular Function GO:0004775 succinate-CoA ligase (ADP-forming) activity    
Biological Process GO:0008152 metabolic process    
PatternScan PS00399 SUCCINYL_COA_LIG_2 NA 267-280
no_ID  
HMMPanther PTHR11117 SUCCINYL-COA 3.6e-206 11-317
HMMPanther PTHR11117:SF0 SUBFAMILY 3.6e-206 11-317
superfamily SSF51735 NAD(P)-binding 3.5e-53 23-152
Wolf-PSORT
Lj2g3v0609720.1	chlo 8.5, chlo_mito 7.5, mito 5.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0609720.1