Miyakogusa Predicted Gene
- Lj2g3v0582830.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
D6PT17_SOYBN |
202 |
55.6 |
73.3 |
(tr|D6PT17) Rj2 protein OS=Glycine max GN=rj2 PE=2 SV=1 |
| TAIR_pep |
AT1G72900.1 |
138 |
46.1 |
65.6 |
| Symbols: | Toll-Interleukin-Resistance (TIR) domain-containing protein | chr1:27432216-27433532 FORWARD LENGTH=363 |
| Medicago |
Medtr5g038180.1 |
199 |
56.5 |
69.6 |
| disease resistance protein | LC | chr5:16688804-16694793 | 20130731 |
| Soybean |
Glyma09g29050.1 |
197 |
55.6 |
70.1 |
|
| LJGI |
gnl|LJGI|TC64144 |
1257 |
100.0 |
100.0 |
weakly similar to UniRef100_Q9FXZ1 Cluster: Resistance protein MG23; n=1; Glycine max|Rep: Resistance protein MG23 - Glycine max (Soybean), partial (20%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v0582830.1 |
length: 258 aa. |
| IPR000157 |
Toll/interleukin-1 receptor homology (TIR) domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| Biological Process |
GO:0007165 |
signal transduction |
|
|
| HMMPfam |
PF01582 |
TIR |
1.5e-30 |
17-151 |
| HMMSmart |
SM00255 |
Toll |
4.3e-38 |
14-156 |
| ProfileScan |
PS50104 |
TIR |
24.630 |
13-156 |
| superfamily |
SSF52200 |
Toll/Interleukin |
1.1e-35 |
3-159 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.10140 |
no description |
8.6e-20 |
13-131 |
| HMMPanther |
PTHR11017 |
LEUCINE-RICH |
2.2e-41 |
7-186 |
| HMMPanther |
PTHR11017:SF130DISEASE |
RESISTANCE |
2.2e-41 |
7-186 |
- Wolf-PSORT
Lj2g3v0582830.1 mito 7, nucl 4, chlo 2, cysk_nucl 2, nucl_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v0582830.1 |
|