Miyakogusa Predicted Gene

Lj2g3v0571630.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SKC9_LOTJA 344 50.5 62.8 (tr|I3SKC9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G00160.1 137 30.4 45.5 | Symbols: | F-box/RNI-like/FBD-like domains-containing protein | chr4:63465-65365 FORWARD LENGTH=453
Medicago Medtr1g041245.1 215 37.6 56.0 | cyclin-like F-box protein | HC | chr1:15330666-15327969 | 20130731
Soybean Glyma08g46590.2 266 44.4 58.6  
LJGI gnl|LJGI|TC68218 509 86.4 86.4 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_111, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0571630.1 length: 375 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 1.2e-05 4-42
ProfileScan PS50181 FBOX 8.994 2-52
superfamily SSF81383 F-box 5.3e-10 3-73
IPR006566 FBD
HMMPfam PF08387 FBD 2.9e-15 295-344
HMMSmart SM00579 domain 1.7e-11 303-375
no_ID  
Gene3D G3DSA:3.80.10.10 no description 6.5e-14 3-343
HMMPanther PTHR32212 FAMILY 1.8e-44 3-188
Seg seg seg NA 118-127
349-367
superfamily SSF52047 RNI-like 1.1e-11 86-281
Wolf-PSORT
Lj2g3v0571630.1	nucl 12, mito 1, plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0571630.1