Miyakogusa Predicted Gene
- Lj2g3v0571450.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SKC9_LOTJA |
164 |
58.8 |
71.3 |
(tr|I3SKC9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT3G54910.3 |
63.2 |
30.1 |
51.5 |
| Symbols: | RNI-like superfamily protein | chr3:20342967-20344277 REVERSE LENGTH=373 |
| Medicago |
Medtr0543s0010.1 |
99.4 |
37.9 |
58.6 |
| F-box/RNI/FBD-like domain protein | LC | scaffold0543:4278-2001 | 20130731 |
| Soybean |
Glyma08g46590.2 |
115 |
43.7 |
59.3 |
|
| LJGI |
gnl|LJGI|GO005265 |
785 |
98.3 |
98.3 |
similar to UniRef100_A5N307 Cluster: Predicted transporter protein; n=1; Clostridium kluyveri DSM 555|Rep: Predicted transporter protein - Clostridium kluyveri DSM 555, partial (5%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v0571450.1 |
length: 137 aa. |
| IPR006566 |
FBD |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF08387 |
FBD |
2.2e-13 |
57-106 |
| HMMSmart |
SM00579 |
domain |
0.00077 |
65-137 |
| no_ID |
|
| HMMPanther |
PTHR32484 |
FAMILY |
7.5e-13 |
1-137 |
- Wolf-PSORT
Lj2g3v0571450.1 cyto 7, plas 2, extr 2, chlo 1, nucl 1, mito 1, chlo_mito 1, golg_plas 1, cysk_plas 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v0571450.1 |
|