| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1MQD7_SOYBN | 521 | 82.2 | 89.1 | (tr|I1MQD7) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT1G06140.1 | 270 | 41.4 | 63.8 | | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:1864796-1866472 FORWARD LENGTH=558 |
| Medicago | Medtr6g066360.1 | 469 | 73.6 | 84.2 | | PPR containing plant-like protein | HC | chr6:24701161-24699312 | 20130731 |
| Soybean | Glyma16g33500.1 | 521 | 82.2 | 89.1 | |
| LJGI | --No_Hits-- |
| Lj2g3v0560050.2 | length: 306 aa. | |||
| IPR002885 | Pentatricopeptide repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF01535 | PPR | 0.0012 | 97-121 126-151 162-188 |
| HMMPfam | PF13041 | PPR_2 | 1.2e-09 | 21-69 |
| HMMTigr | TIGR00756 | PPR: | 4.3e-05 | 25-57 126-160 161-195 |
| ProfileScan | PS51375 | PPR | 5.514 | 22-56 123-158 92-122 57-91 159-194 195-225 261-295 |
| IPR011990 | Tetratricopeptide-like helical | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:1.25.40.10 | no description | 8.3e-11 | 222-281 |
| no_ID | ||||
| HMMPanther | PTHR24015 | FAMILY | 2.6e-128 | 1-305 |
| HMMPanther | PTHR24015:SF169PENTATRICOPEPTIDE | (PPR) | 2.6e-128 | 1-305 |
Lj2g3v0560050.2 nucl 5, cyto 5, cyto_nucl 5
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj2g3v0560050.2 |