Miyakogusa Predicted Gene

Lj2g3v0550010.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L3F3_SOYBN 159 59.3 69.7 (tr|I1L3F3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G25440.1 108 41.3 56.0 | Symbols: ZFWD1 | zinc finger WD40 repeat protein 1 | chr4:13007107-13009381 REVERSE LENGTH=430
Medicago Medtr6g465150.1 155 56.2 67.1 | zinc finger CCCH domain protein | HC | chr6:23065003-23059765 | 20130731
Soybean Glyma09g27300.1 159 59.3 69.7  
LJGI gnl|LJGI|TC57603 856 100.0 100.0 similar to UniRef100_A7QVM3 Cluster: Chromosome chr16 scaffold_189, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_189, whole genome shotgun sequence - Vitis vinifera (Grape), partial (40%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0550010.1 length: 144 aa.
IPR000571 Zinc finger, CCCH-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.1000.10 no description 1.4e-07 114-135
HMMPfam PF00642 zf-CCCH 2e-08 115-135
HMMSmart SM00356 zinc 4.8e-06 21-46
112-136
ProfileScan PS50103 ZF_C3H1 14.164 21-47
111-137
no_ID  
Seg seg seg NA 84-110
superfamily SSF90229 CCCH 0.0092 108-136
19-46
Wolf-PSORT
Lj2g3v0550010.1	chlo 6, nucl 4, chlo_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0550010.1