database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | I1L3P9_SOYBN | 570 | 65.7 | 74.8 | (tr|I1L3P9) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
TAIR_pep | AT5G08430.1 | 342 | 48.4 | 67.6 | | Symbols: | SWIB/MDM2 domain;Plus-3;GYF | chr5:2716974-2720095 FORWARD LENGTH=553 |
Medicago | Medtr3g064260.1 | 300 | 48.8 | 67.6 | | zinc finger CCCH domain protein | LC | chr3:28905898-28897678 | 20130731 |
Soybean | Glyma09g28660.1 | 495 | 57.3 | 65.6 | |
LJGI | gnl|LJGI|TC64833 | 1072 | 99.8 | 99.8 |
Lj2g3v0547900.1 | length: 797 aa. | |||
IPR003121 | SWIB/MDM2 domain | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Molecular Function | GO:0005515 | protein binding | ||
HMMPfam | PF02201 | SWIB | 2e-14 | 47-114 |
superfamily | SSF47592 | SWIB/MDM2 | 1.8e-22 | 25-125 |
IPR003169 | GYF | |||
Molecular Function | GO:0005515 | protein binding | ||
Gene3D | G3DSA:3.30.1490.40 | no description | 3.4e-17 | 695-749 |
HMMPfam | PF02213 | GYF | 4.4e-14 | 695-743 |
HMMSmart | SM00444 | Contains | 3.6e-09 | 694-748 |
ProfileScan | PS50829 | GYF | 14.493 | 693-747 |
superfamily | SSF55277 | GYF | 8.9e-16 | 677-754 |
IPR004343 | Plus-3 | |||
Molecular Function | GO:0003677 | DNA binding | ||
Cellular Component | GO:0005634 | nucleus | ||
Biological Process | GO:0006352 | DNA-dependent transcription, initiation | ||
Biological Process | GO:0016570 | histone modification | ||
HMMPfam | PF03126 | Plus-3 | 6.5e-19 | 173-270 |
ProfileScan | PS51360 | PLUS3 | 27.178 | 168-294 |
IPR018144 | Plus-3 domain, subgroup | |||
Molecular Function | GO:0003677 | DNA binding | ||
Cellular Component | GO:0005634 | nucleus | ||
Biological Process | GO:0006352 | DNA-dependent transcription, initiation | ||
Biological Process | GO:0016570 | histone modification | ||
HMMSmart | SM00719 | Short | 4.9e-33 | 168-271 |
no_ID | ||||
Coil | coil | coiled-coil | NA | 295-316 |
Gene3D | G3DSA:1.10.245.10 | no description | 7.1e-23 | 27-122 |
HMMPanther | PTHR26218 | FAMILY | 2e-47 | 39-354 |
HMMPanther | PTHR26218:SF3 | SUBFAMILY | 2e-47 | 39-354 |
Seg | seg | seg | NA | 21-34 122-132 439-444 562-575 654-668 |
Lj2g3v0547900.1 nucl 14
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj2g3v0547900.1 |