Miyakogusa Predicted Gene

Lj2g3v0547900.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L3P9_SOYBN 570 65.7 74.8 (tr|I1L3P9) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G08430.1 342 48.4 67.6 | Symbols: | SWIB/MDM2 domain;Plus-3;GYF | chr5:2716974-2720095 FORWARD LENGTH=553
Medicago Medtr3g064260.1 300 48.8 67.6 | zinc finger CCCH domain protein | LC | chr3:28905898-28897678 | 20130731
Soybean Glyma09g28660.1 495 57.3 65.6  
LJGI gnl|LJGI|TC64833 1072 99.8 99.8  
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0547900.1 length: 797 aa.
IPR003121 SWIB/MDM2 domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF02201 SWIB 2e-14 47-114
superfamily SSF47592 SWIB/MDM2 1.8e-22 25-125
IPR003169 GYF
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:3.30.1490.40 no description 3.4e-17 695-749
HMMPfam PF02213 GYF 4.4e-14 695-743
HMMSmart SM00444 Contains 3.6e-09 694-748
ProfileScan PS50829 GYF 14.493 693-747
superfamily SSF55277 GYF 8.9e-16 677-754
IPR004343 Plus-3
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006352 DNA-dependent transcription, initiation    
Biological Process GO:0016570 histone modification    
HMMPfam PF03126 Plus-3 6.5e-19 173-270
ProfileScan PS51360 PLUS3 27.178 168-294
IPR018144 Plus-3 domain, subgroup
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006352 DNA-dependent transcription, initiation    
Biological Process GO:0016570 histone modification    
HMMSmart SM00719 Short 4.9e-33 168-271
no_ID  
Coil coil coiled-coil NA 295-316
Gene3D G3DSA:1.10.245.10 no description 7.1e-23 27-122
HMMPanther PTHR26218 FAMILY 2e-47 39-354
HMMPanther PTHR26218:SF3 SUBFAMILY 2e-47 39-354
Seg seg seg NA 21-34
122-132
439-444
562-575
654-668
Wolf-PSORT
Lj2g3v0547900.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0547900.1