Miyakogusa Predicted Gene

Lj2g3v0533560.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S8Q3_MEDTR 275 74.1 80.5 (tr|I3S8Q3) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1
TAIR_pep AT1G27050.1 166 46.3 61.5 | Symbols: ATHB54, HB54 | homeobox protein 54 | chr1:9393706-9394408 FORWARD LENGTH=205
Medicago Medtr5g038225.1 272 73.5 80.0 | homeobox transcription factor | HC | chr5:16718253-16716063 | 20130731
Soybean Glyma01g04880.1 257 72.2 78.6  
LJGI gnl|LJGI|TC66463 1106 100.0 100.0 similar to UniRef100_A7Q2Q8 Cluster: Chromosome chr1 scaffold_46, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_46, whole genome shotgun sequence - Vitis vinifera (Grape), partial (60%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0533560.1 length: 185 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 6.3e-07 40-90
HMMSmart SM00360 RNA 6.8e-06 39-109
ProfileScan PS50102 RRM 11.605 38-113
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 3e-10 19-114
no_ID  
Seg seg seg NA 17-38
superfamily SSF54928 RNA-binding 1.2e-11 1-116
Wolf-PSORT
Lj2g3v0533560.1	mito 7, nucl 4, chlo 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0533560.1