Miyakogusa Predicted Gene
- Lj2g3v0523280.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7LE53_SOYBN |
584 |
82.6 |
87.1 |
(tr|K7LE53) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G44150.1 |
434 |
61.5 |
73.9 |
| Symbols: ASHH3, SDG7 | histone-lysine N-methyltransferase ASHH3 | chr2:18258863-18261003 FORWARD LENGTH=363 |
| Medicago |
Medtr6g059310.1 |
516 |
74.6 |
80.6 |
| histone-lysine N-methyltransferase | HC | chr6:20359719-20350572 | 20130731 |
| Soybean |
Glyma16g33220.1 |
568 |
81.1 |
86.0 |
|
| LJGI |
gnl|LJGI|GO010216 |
1128 |
99.8 |
99.8 |
similar to UniRef100_A7PAZ7 Cluster: Chromosome chr16 scaffold_10, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_10, whole genome shotgun sequence - Vitis vinifera (Grape), partial (42%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v0523280.1 |
length: 373 aa. |
| IPR001214 |
SET domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00856 |
SET |
1.5e-25 |
150-255 |
| HMMSmart |
SM00317 |
SET |
1.5e-41 |
139-262 |
| ProfileScan |
PS50280 |
SET |
31.643 |
138-260 |
| IPR003616 |
Post-SET domain |
| HMMSmart |
SM00508 |
Cysteine-rich |
0.0026 |
262-278 |
| ProfileScan |
PS50868 |
POST_SET |
9.167 |
262-278 |
| IPR006560 |
AWS |
| Cellular Component |
GO:0005634 |
nucleus |
|
|
| Molecular Function |
GO:0018024 |
histone-lysine N-methyltransferase activity |
|
|
| HMMSmart |
SM00570 |
associated |
3.7e-09 |
90-138 |
| ProfileScan |
PS51215 |
AWS |
11.809 |
90-137 |
| IPR025787 |
Histone-lysine N-methyltransferase, SET2, plant |
| ProfileScan |
PS51578 |
SAM_MT43_SET2_2 |
100.720 |
71-320 |
| no_ID |
|
| Gene3D |
G3DSA:2.170.270.10 |
no description |
3.2e-60 |
67-279 |
| HMMPanther |
PTHR22884 |
SET |
1e-123 |
42-280 |
| HMMPanther |
PTHR22884:SF35 |
SET |
1e-123 |
42-280 |
| Seg |
seg |
seg |
NA |
116-130 |
| superfamily |
SSF82199 |
SET |
1.8e-73 |
51-274 |
- Wolf-PSORT
Lj2g3v0523280.1 nucl 8, cyto 2, mito 2, chlo 1, cyto_mito 1, golg_plas 1, cyto_pero 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v0523280.1 |
|