Miyakogusa Predicted Gene

Lj2g3v0523270.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L1I2_SOYBN 265 61.4 75.3 (tr|I1L1I2) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G12700.1 155 39.7 63.6 | Symbols: | ATP binding;nucleic acid binding;helicases | chr1:4323722-4326227 REVERSE LENGTH=735
Medicago Medtr0110s0060.1 260 64.9 81.2 | pentatricopeptide (PPR) repeat protein | HC | scaffold0110:45179-40986 | 20130731
Soybean Glyma09g30530.1 263 65.8 85.3  
LJGI gnl|LJGI|BP042107 557 97.4 97.4 weakly similar to UniRef100_Q1SMZ4 Cluster: Tetratricopeptide-like helical; n=1; Medicago truncatula|Rep: Tetratricopeptide-like helical - Medicago truncatula (Barrel medic), partial (11%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0523270.1 length: 286 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0017 146-175
HMMPfam PF12854 PPR_1 2e-08 244-273
HMMPfam PF13041 PPR_2 7.8e-11 178-227
HMMTigr TIGR00756 PPR: 4.4e-06 113-145
149-180
182-215
216-241
247-274
ProfileScan PS51375 PPR 6.599 109-143
144-178
179-213
214-248
249-279
no_ID  
HMMPanther PTHR24015 FAMILY 3.2e-48 93-272
HMMPanther PTHR24015:SF0 SUBFAMILY 3.2e-48 93-272
Seg seg seg NA 74-92
Wolf-PSORT
Lj2g3v0523270.1	chlo 10.5, chlo_mito 6.83333, mito 2, cyto_mito 1.83333
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0523270.1