Miyakogusa Predicted Gene

Lj2g3v0523240.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LEH5_SOYBN 469 69.1 82.9 (tr|K7LEH5) Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=1
TAIR_pep AT1G12775.1 282 38.2 59.9 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:4353906-4355840 FORWARD LENGTH=644
Medicago Medtr0308s0020.1 455 65.0 81.8 | pentatricopeptide (PPR) repeat protein | LC | scaffold0308:7816-9441 | 20130731
Soybean Glyma09g30530.1 470 69.1 82.9  
LJGI gnl|LJGI|FS336741 841 91.3 91.3 weakly similar to UniRef100_A7QVP2 Cluster: Chromosome chr14 scaffold_190, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_190, whole genome shotgun sequence - Vitis vinifera (Grape), partial (30%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0523240.1 length: 364 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF12854 PPR_1 3e-08 158-188
262-294
HMMPfam PF13041 PPR_2 4.5e-19 91-139
196-244
301-350
HMMTigr TIGR00756 PPR: 1.4e-05 94-128
129-162
164-198
199-233
234-268
269-303
304-338
339-364
ProfileScan PS51375 PPR 10.687 57-91
92-126
127-161
162-196
197-231
232-266
267-301
302-336
337-364
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00079 261-327
no_ID  
HMMPanther PTHR24015 FAMILY 1.6e-114 4-364
HMMPanther PTHR24015:SF0 SUBFAMILY 1.6e-114 4-364
Seg seg seg NA 2-37
Wolf-PSORT
Lj2g3v0523240.1	chlo 8, mito 4.5, cyto_mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0523240.1