Miyakogusa Predicted Gene

Lj2g3v0521150.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LE47_SOYBN 486 68.4 79.9 (tr|K7LE47) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G12700.1 256 37.6 59.6 | Symbols: | ATP binding;nucleic acid binding;helicases | chr1:4323722-4326227 REVERSE LENGTH=735
Medicago Medtr3g054110.1 497 68.2 80.2 | pentatricopeptide (PPR) repeat protein | HC | chr3:21460323-21462352 | 20130731
Soybean Glyma16g33170.1 473 67.7 79.9  
LJGI gnl|LJGI|FS346680 141 82.4 82.4 weakly similar to UniRef100_A7PJG0 Cluster: Chromosome chr12 scaffold_18, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_18, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0521150.2 length: 351 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.36 293-322
HMMPfam PF13041 PPR_2 7.4e-16 9-57
79-128
149-197
220-267
HMMTigr TIGR00756 PPR: 4.5e-09 12-46
48-81
82-115
117-151
152-185
188-220
222-255
257-290
ProfileScan PS51375 PPR 7.783 10-44
45-79
80-114
115-149
150-184
220-254
185-219
255-289
290-324
no_ID  
HMMPanther PTHR24015 FAMILY 2.3e-105 4-333
HMMPanther PTHR24015:SF0 SUBFAMILY 2.3e-105 4-333
Seg seg seg NA 233-253
Wolf-PSORT
Lj2g3v0521150.2	chlo 7, nucl 3, cyto 2, nucl_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0521150.2