Miyakogusa Predicted Gene

Lj2g3v0520130.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MQA1_SOYBN 833 75.3 85.1 (tr|I1MQA1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G33350.1 603 55.0 70.7 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:12090071-12091687 REVERSE LENGTH=538
Medicago Medtr6g059820.1 818 73.6 84.4 | PPR containing plant-like protein | HC | chr6:20520961-20518530 | 20130731
Soybean Glyma16g33110.1 833 75.3 85.1  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0520130.1 length: 524 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0071 194-219
273-293
375-399
HMMPfam PF12854 PPR_1 6.5e-10 159-188
HMMPfam PF13041 PPR_2 1.6e-07 301-347
HMMTigr TIGR00756 PPR: 0.00038 162-192
194-219
302-330
338-371
376-400
ProfileScan PS51375 PPR 5.393 160-194
128-159
195-225
299-333
268-298
372-402
336-371
404-434
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.1e-10 369-463
no_ID  
HMMPanther PTHR24015 FAMILY 2.5e-222 15-509
HMMPanther PTHR24015:SF7 SUBFAMILY 2.5e-222 15-509
superfamily SSF48452 TPR-like 8.4e-06 160-463
Wolf-PSORT
Lj2g3v0520130.1	chlo 11, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0520130.1