Miyakogusa Predicted Gene

Lj2g3v0510100.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KMW7_MEDTR 686 76.5 84.7 (tr|G7KMW7) APO protein OS=Medicago truncatula GN=MTR_6g059930 PE=4 SV=1
TAIR_pep AT1G64810.2 518 60.5 73.1 | Symbols: APO1 | Arabidopsis thaliana protein of unknown function (DUF794) | chr1:24086810-24088276 FORWARD LENGTH=460
Medicago Medtr6g059930.1 686 76.5 84.7 | APO RNA-binding protein | HC | chr6:20583169-20579100 | 20130731
Soybean Glyma16g33060.1 682 75.4 83.6  
LJGI gnl|LJGI|AW163946 642 100.0 100.0 similar to UniRef100_A7PK14 Cluster: Chromosome chr15 scaffold_19, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_19, whole genome shotgun sequence - Vitis vinifera (Grape), partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0510100.1 length: 440 aa.
IPR023342 APO domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
HMMPfam PF05634 APO_RNA-bind 5.1e-27 65-265
304-418
ProfileScan PS51499 APO 28.911 161-246
333-418
no_ID  
HMMPanther PTHR10388 EUKARYOTIC 4e-134 55-272
HMMPanther PTHR10388:SF5 APO1 4e-134 55-272
Seg seg seg NA 82-102
Wolf-PSORT
Lj2g3v0510100.1	cyto 11, chlo 1, plas 1, cysk 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0510100.1