Miyakogusa Predicted Gene

Lj2g3v0509060.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL R0H8P7_9BRAS 432 77.9 81.5 (tr|R0H8P7) Uncharacterized protein OS=Capsella rubella GN=CARUB_v10001659mg PE=4 SV=1
TAIR_pep AT4G10340.1 424 78.6 81.1 | Symbols: LHCB5 | light harvesting complex of photosystem II 5 | chr4:6408200-6409496 FORWARD LENGTH=280
Medicago Medtr6g060175.1 430 78.0 80.5 | light-harvesting complex I chlorophyll A/B-binding protein | HC | chr6:20668553-20672457 | 20130731
Soybean Glyma09g28200.1 429 78.5 81.7  
LJGI gnl|LJGI|TC68768 1671 100.0 100.0 homologue to UniRef100_Q0PWS5 Cluster: Chloroplast pigment-binding protein CP26; n=1; Nicotiana tabacum|Rep: Chloroplast pigment-binding protein CP26 - Nicotiana tabacum (Common tobacco), partial (90%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0509060.1 length: 280 aa.
IPR001344 Chlorophyll A-B binding protein, plant
method AccNumber shortName E-value location
Biological Process GO:0009765 photosynthesis, light harvesting    
Cellular Component GO:0016020 membrane    
HMMPanther PTHR21649 CHLOROPHYLL 9e-110 4-280
IPR022796 Chlorophyll A-B binding protein
HMMPfam PF00504 Chloroa_b-bind 2.4e-45 82-243
IPR023329 Chlorophyll a/b binding protein domain
Gene3D G3DSA:1.10.3460.10 no description 3.4e-69 78-268
superfamily SSF103511 Chlorophyll 1.9e-57 60-276
no_ID  
HMMPanther PTHR21649:SF0 SUBFAMILY 9e-110 4-280
Seg seg seg NA 22-30
40-55
171-186
Wolf-PSORT
Lj2g3v0509060.1	chlo 11, cyto 1, E.R. 1, pero 1, cyto_pero 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0509060.1