| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7KNB4_MEDTR | 1019 | 80.0 | 87.1 | (tr|G7KNB4) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_6g060510 PE=4 SV=1 |
| TAIR_pep | AT5G66520.1 | 513 | 42.8 | 60.5 | | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:26551879-26553741 FORWARD LENGTH=620 |
| Medicago | Medtr6g060510.1 | 1021 | 80.0 | 87.1 | | pentatricopeptide (PPR) repeat protein | HC | chr6:20818019-20812038 | 20130731 |
| Soybean | Glyma16g32980.1 | 1037 | 80.3 | 87.2 | |
| LJGI | gnl|LJGI|GO023654 | 1277 | 99.8 | 99.8 | similar to UniRef100_A7NZW4 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (33%) |
| Lj2g3v0489020.2 | length: 623 aa. | |||
| IPR002885 | Pentatricopeptide repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF01535 | PPR | 0.017 | 154-175 183-212 388-412 |
| HMMPfam | PF13041 | PPR_2 | 2.2e-12 | 212-259 318-361 |
| HMMTigr | TIGR00756 | PPR: | 1.3e-07 | 183-214 214-248 318-349 |
| ProfileScan | PS51375 | PPR | 6.785 | 78-114 181-215 150-180 216-246 314-348 282-312 385-415 349-384 |
| IPR011990 | Tetratricopeptide-like helical | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:1.25.40.10 | no description | 4.3e-09 | 433-472 |
| no_ID | ||||
| HMMPanther | PTHR24015 | FAMILY | 1.9e-252 | 27-623 |
| HMMPanther | PTHR24015:SF61 | PGR3 | 1.9e-252 | 27-623 |
| HMMPfam | PF14432 | DYW_deaminase | 4.6e-16 | 500-613 |
| Seg | seg | seg | NA | 537-549 |
Lj2g3v0489020.2 cyto 6, chlo 3.5, nucl 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj2g3v0489020.2 |