Miyakogusa Predicted Gene

Lj2g3v0486970.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MQ84_SOYBN 1996 88.0 91.8 (tr|I1MQ84) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G51660.1 1625 71.1 82.8 | Symbols: CPSF160, ATCPSF160 | cleavage and polyadenylation specificity factor 160 | chr5:20980250-20989268 FORWARD LENGTH=1442
Medicago Medtr6g461810.1 1966 86.5 91.5 | cleavage and polyadenylation specificity factor subunit 1 | HC | chr6:21540099-21517843 | 20130731
Soybean Glyma16g32890.1 1995 88.0 91.8  
LJGI gnl|LJGI|FS345956 1564 100.0 100.0 similar to UniRef100_A7QGU1 Cluster: Chromosome chr16 scaffold_94, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_94, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0486970.2 length: 1100 aa.
IPR004871 Cleavage/polyadenylation specificity factor, A subunit, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Cellular Component GO:0005634 nucleus    
HMMPfam PF03178 CPSF_A 1.9e-84 733-1065
no_ID  
HMMPanther PTHR10644 DNA 0 2-1093
HMMPanther PTHR10644:SF2 CLEAVAGE 0 2-1093
HMMPfam PF10433 MMS1_N 3.8e-21 21-308
Seg seg seg NA 24-37
316-330
368-381
Wolf-PSORT
Lj2g3v0486970.2	nucl 6, cyto 4, cysk_nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0486970.2