Miyakogusa Predicted Gene
- Lj2g3v0463790.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MIP5_SOYBN |
260 |
69.3 |
81.9 |
(tr|K7MIP5) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G51790.1 |
122 |
42.0 |
62.5 |
| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr5:21039762-21040594 FORWARD LENGTH=204 |
| Medicago |
Medtr0007s0330.1 |
243 |
64.9 |
78.9 |
| transcription factor | HC | scaffold0007:196183-192795 | 20130731 |
| Soybean |
Glyma16g32610.1 |
260 |
70.1 |
82.2 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v0463790.1 |
length: 206 aa. |
| IPR011598 |
Myc-type, basic helix-loop-helix (bHLH) domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0046983 |
protein dimerization activity |
|
|
| Gene3D |
G3DSA:4.10.280.10 |
no description |
3.7e-10 |
22-92 |
| HMMPfam |
PF00010 |
HLH |
1.9e-09 |
24-72 |
| HMMSmart |
SM00353 |
helix |
6.4e-05 |
25-77 |
| ProfileScan |
PS50888 |
BHLH |
13.668 |
19-71 |
| superfamily |
SSF47459 |
HLH, |
7.3e-17 |
17-104 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
61-89 |
- Wolf-PSORT
Lj2g3v0463790.1 cyto 10, nucl 1, mito 1, extr 1, E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v0463790.1 |
|