Miyakogusa Predicted Gene
- Lj2g3v0450440.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
B7FI27_MEDTR |
619 |
90.7 |
94.7 |
(tr|B7FI27) Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 |
| TAIR_pep |
AT1G16560.3 |
474 |
68.0 |
80.7 |
| Symbols: | Per1-like family protein | chr1:5668945-5670343 FORWARD LENGTH=342 |
| Medicago |
Medtr6g465410.1 |
622 |
91.0 |
95.0 |
| post-GPI attachment-like factor-protein | HC | chr6:23238097-23246146 | 20130731 |
| Soybean |
Glyma09g27200.1 |
552 |
82.3 |
90.5 |
|
| LJGI |
gnl|LJGI|TC72507 |
946 |
99.8 |
99.8 |
similar to UniRef100_Q2V9B6 Cluster: Per1-like family protein; n=1; Solanum tuberosum|Rep: Per1-like family protein - Solanum tuberosum (Potato), partial (52%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v0450440.1 |
length: 342 aa. |
| IPR007217 |
Per1-like |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR13148 |
PER1-RELATED |
1.9e-126 |
1-342 |
| HMMPfam |
PF04080 |
Per1 |
2.6e-84 |
68-330 |
| no_ID |
|
| HMMPanther |
PTHR13148:SF0 |
SUBFAMILY |
1.9e-126 |
1-342 |
| Seg |
seg |
seg |
NA |
5-20 |
- Wolf-PSORT
Lj2g3v0450440.1 plas 6, E.R. 3, nucl_plas 3, cysk_plas 3, mito_plas 3, cyto_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v0450440.1 |
|