Miyakogusa Predicted Gene
- Lj2g3v0371730.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1N6R2_SOYBN |
138 |
86.6 |
92.7 |
(tr|I1N6R2) 60S ribosomal protein L36 OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT2G37600.2 |
120 |
89.9 |
92.8 |
| Symbols: | Ribosomal protein L36e family protein | chr2:15774410-15775203 REVERSE LENGTH=113 |
| Medicago |
Medtr6g053730.2 |
134 |
87.2 |
91.0 |
| 60S ribosomal protein L36 | HC | chr6:19375356-19377961 | 20130731 |
| Soybean |
Glyma19g06460.1 |
138 |
86.6 |
92.7 |
|
| LJGI |
gnl|LJGI|TC65935 |
400 |
100.0 |
100.0 |
homologue to UniRef100_A5ATP3 Cluster: 60S ribosomal protein L36; n=1; Vitis vinifera|Rep: 60S ribosomal protein L36 - Vitis vinifera (Grape), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v0371730.1 |
length: 115 aa. |
| IPR000509 |
Ribosomal protein L36e |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003735 |
structural constituent of ribosome |
|
|
| Cellular Component |
GO:0005622 |
intracellular |
|
|
| Cellular Component |
GO:0005840 |
ribosome |
|
|
| Biological Process |
GO:0006412 |
translation |
|
|
| HMMPanther |
PTHR10114 |
60S |
6.1e-41 |
13-81 |
| HMMPfam |
PF01158 |
Ribosomal_L36e |
5.5e-32 |
13-81 |
| PatternScan |
PS01190 |
RIBOSOMAL_L36E |
NA |
35-45 |
- Wolf-PSORT
Lj2g3v0371730.1 mito 5, vacu 3, chlo_mito 3, cyto 2, extr 2, E.R._vacu 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v0371730.1 |
|