Miyakogusa Predicted Gene

Lj2g3v0371710.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S7X9_LOTJA 570 80.4 86.1 (tr|I3S7X9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G38150.2 299 65.0 78.3 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:17901211-17902119 REVERSE LENGTH=302
Medicago Medtr8g098445.1 408 56.5 64.7 | PPR containing plant-like protein | HC | chr8:41071236-41073243 | 20130731
Soybean Glyma11g07010.1 466 68.1 75.1  
LJGI gnl|LJGI|TC76582 2030 99.7 99.7 similar to UniRef100_A7P8U5 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (61%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0371710.1 length: 345 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 7.8e-07 179-204
HMMPfam PF13041 PPR_2 7.4e-15 207-256
HMMTigr TIGR00756 PPR: 2.3e-07 179-207
210-244
245-279
ProfileScan PS51375 PPR 8.232 173-207
208-242
243-277
278-312
no_ID  
HMMPanther PTHR24015 FAMILY 6.9e-42 157-314
Wolf-PSORT
Lj2g3v0371710.1	nucl 7, chlo 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0371710.1 Not targeted -36.787 -0.305 -3.874 45.85% -32.609