| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7IND7_MEDTR | 591 | 68.2 | 84.8 | (tr|G7IND7) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_2g035630 PE=4 SV=1 |
| TAIR_pep | AT1G62930.1 | 324 | 39.6 | 65.1 | | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:23306534-23308423 FORWARD LENGTH=629 |
| Medicago | Medtr0308s0020.1 | 600 | 70.1 | 85.6 | | pentatricopeptide (PPR) repeat protein | LC | scaffold0308:7816-9441 | 20130731 |
| Soybean | Glyma09g30160.1 | 578 | 67.2 | 84.3 | |
| LJGI | gnl|LJGI|GO037297 | 852 | 95.4 | 95.4 | weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14 scaffold_54, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_54, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%) |
| Lj2g3v0371570.2 | length: 431 aa. | |||
| IPR002885 | Pentatricopeptide repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF12854 | PPR_1 | 1.5e-11 | 38-69 143-175 249-280 |
| HMMPfam | PF13041 | PPR_2 | 3e-13 | 77-125 182-231 288-336 358-404 |
| HMMTigr | TIGR00756 | PPR: | 2.4e-08 | 45-71 80-114 115-149 150-183 185-219 221-254 255-284 290-323 325-358 360-393 |
| ProfileScan | PS51375 | PPR | 10.019 | 43-77 78-112 113-147 148-182 183-217 218-252 253-287 288-322 323-357 358-392 393-427 |
| IPR011990 | Tetratricopeptide-like helical | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:1.25.40.10 | no description | 1.3e-05 | 290-420 |
| no_ID | ||||
| HMMPanther | PTHR24015 | FAMILY | 3.5e-142 | 22-425 |
| HMMPanther | PTHR24015:SF0 | SUBFAMILY | 3.5e-142 | 22-425 |
| superfamily | SSF48452 | TPR-like | 0.012 | 323-422 78-177 |
Lj2g3v0371570.2 chlo 8, nucl 1, cyto 1, mito 1, plas 1, extr 1, vacu 1, cyto_nucl 1, nucl_plas 1, mito_plas 1, cyto_plas 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj2g3v0371570.2 |