Miyakogusa Predicted Gene
- Lj2g3v0346230.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LDP3_SOYBN |
639 |
65.3 |
77.2 |
(tr|I1LDP3) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT4G25610.1 |
315 |
41.8 |
60.3 |
| Symbols: | C2H2-like zinc finger protein | chr4:13063801-13066860 FORWARD LENGTH=586 |
| Medicago |
Medtr1g100810.1 |
570 |
59.1 |
69.7 |
| C2H2-like zinc finger protein, putative | HC | chr1:45258128-45251792 | 20130731 |
| Soybean |
Glyma10g37780.1 |
590 |
66.1 |
77.2 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v0346230.1 |
length: 502 aa. |
| IPR007087 |
Zinc finger, C2H2 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| PatternScan |
PS00028 |
ZINC_FINGER_C2H2_1 |
NA |
79-100 |
| ProfileScan |
PS50157 |
ZINC_FINGER_C2H2_2 |
9.411 |
77-105 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
273-299 |
| Seg |
seg |
seg |
NA |
273-294 |
- Wolf-PSORT
Lj2g3v0346230.1 nucl 11.5, cyto_nucl 7, cyto 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v0346230.1 |
|