Miyakogusa Predicted Gene
- Lj2g3v0346170.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SS87_LOTJA |
129 |
100.0 |
100.0 |
(tr|I3SS87) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT4G23430.1 |
82.4 |
63.2 |
80.7 |
| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr4:12229171-12231493 FORWARD LENGTH=320 |
| Medicago |
Medtr1g100305.1 |
119 |
88.3 |
96.7 |
| NAD(P)-binding rossmann-fold protein | HC | chr1:45207890-45202755 | 20130731 |
| Soybean |
Glyma10g37760.1 |
110 |
85.0 |
93.3 |
|
| LJGI |
gnl|LJGI|TC71403 |
363 |
100.0 |
100.0 |
similar to UniRef100_Q6RVV4 Cluster: Short-chain dehydrogenase Tic32; n=1; Pisum sativum|Rep: Short-chain dehydrogenase Tic32 - Pisum sativum (Garden pea), partial (98%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v0346170.1 |
length: 60 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR24320 |
FAMILY |
7.6e-14 |
1-60 |
| HMMPanther |
PTHR24320:SF0 |
SUBFAMILY |
7.6e-14 |
1-60 |
- Wolf-PSORT
Lj2g3v0346170.1 chlo 6, cyto 3, chlo_mito 3, nucl 2, extr 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v0346170.1 |
|