Miyakogusa Predicted Gene

Lj2g3v0276790.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KLK7_MEDTR 346 55.9 66.8 (tr|G7KLK7) RING-H2 finger protein ATL3B OS=Medicago truncatula GN=MTR_6g055030 PE=4 SV=1
TAIR_pep AT3G05200.1 179 35.3 49.9 | Symbols: ATL6 | RING/U-box superfamily protein | chr3:1477377-1478573 FORWARD LENGTH=398
Medicago Medtr6g055030.1 346 55.9 66.8 | zinc finger, C3HC4 type (RING finger) protein | HC | chr6:19684828-19683174 | 20130731
Soybean Glyma09g26080.1 304 52.5 60.3  
LJGI gnl|LJGI|TC73493 1949 99.9 99.9 similar to UniRef100_Q8RXX9 Cluster: RING-H2 finger protein ATL3B precursor; n=2; Arabidopsis thaliana|Rep: RING-H2 finger protein ATL3B precursor - Arabidopsis thaliana (Mouse-ear cress), partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0276790.1 length: 328 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 8e-17 123-167
HMMSmart SM00184 Ring 1.1e-06 124-165
ProfileScan PS50089 ZF_RING_2 12.843 124-166
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.1e-19 121-169
no_ID  
HMMPanther PTHR22764 RING 5.9e-38 34-173
HMMPanther PTHR22764:SF10 PUTATIVE 5.9e-38 34-173
Seg seg seg NA 210-222
289-301
superfamily SSF57850 RING/U-box 7.3e-21 94-172
Wolf-PSORT
Lj2g3v0276790.1	chlo 4, vacu 3, cyto 2, extr 2, chlo_mito 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0276790.1