Miyakogusa Predicted Gene
- Lj2g3v0276780.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MPY4_SOYBN |
209 |
71.5 |
81.8 |
(tr|I1MPY4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G52220.1 |
122 |
53.5 |
59.8 |
| Symbols: | CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607); Has 127 Blast hits to 127 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 70; Fungi - 17; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | chr5:21207097-21207678 REVERSE LENGTH=145 |
| Medicago |
Medtr6g471020.1 |
196 |
69.3 |
79.6 |
| chromosome transmission fidelity protein, putative | HC | chr6:25417447-25413582 | 20130731 |
| Soybean |
Glyma16g31920.1 |
209 |
71.5 |
81.8 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v0276780.1 |
length: 137 aa. |
| IPR018607 |
Chromosome transmission fidelity protein 8 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF09696 |
Ctf8 |
3e-21 |
16-111 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
66-80 |
- Wolf-PSORT
Lj2g3v0276780.1 cyto 4, nucl 3, extr 3, chlo 2, mito 2, chlo_mito 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v0276780.1 |
|