Miyakogusa Predicted Gene

Lj2g3v0179290.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S8R8_LOTJA 373 100.0 100.0 (tr|I3S8R8) Ribulose bisphosphate carboxylase small chain OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G67090.1 289 76.4 84.3 | Symbols: RBCS1A | ribulose bisphosphate carboxylase small chain 1A | chr1:25048465-25049249 REVERSE LENGTH=180
Medicago Medtr6g018300.1 318 85.2 89.8 | ribulose bisphosphate carboxylase small chain | HC | chr6:7006187-7007659 | 20130731
Soybean Glyma13g07610.1 314 84.9 89.9  
LJGI gnl|LJGI|TC60984 1059 100.0 100.0 similar to UniRef100_Q39832 Cluster: Ribulose-1,5-bisphosphate carboxylase small subunit precursor; n=1; Glycine max|Rep: Ribulose-1,5-bisphosphate carboxylase small subunit precursor - Glycine max (Soybean), partial (98%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0179290.1 length: 177 aa.
IPR000894 Ribulose bisphosphate carboxylase small chain, domain
method AccNumber shortName E-value location
Gene3D G3DSA:3.30.190.10 no description 3.8e-62 55-176
HMMPfam PF00101 RuBisCO_small 5.4e-43 65-175
HMMSmart SM00961 Ribulose 8.3e-41 65-174
superfamily SSF55239 RuBisCO, 1.9e-55 55-177
IPR024680 Ribulose-1,5-bisphosphate carboxylase small subunit, N-terminal
HMMPfam PF12338 RbcS 1.3e-18 2-41
IPR024681 Ribulose bisphosphate carboxylase, small chain
FPrintScan PR00152 RUBISCOSMALL 2.3e-74 16-33
43-61
64-90
92-107
114-143
148-174
no_ID  
HMMPanther PTHR31262 FAMILY 3.4e-97 1-177
HMMPanther PTHR31262:SF0 SUBFAMILY 3.4e-97 1-177
Wolf-PSORT
Lj2g3v0179290.1	chlo 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0179290.1