Miyakogusa Predicted Gene

Lj2g3v0178230.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr2

Full length sequence(43247325 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3T6J6_LOTJA 424 83.9 83.9 (tr|I3T6J6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT2G43630.1 103 32.6 49.6 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, nucleus, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G59640.2); Has 67 Blast hits to 67 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 1; Plants - 49; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink). | chr2:18096255-18097344 FORWARD LENGTH=274

Medicago Medtr6g012760.1 193 43.8 55.1 | transmembrane protein, putative | HC | chr6:3957866-3956581 | 20130731

Soybean Glyma07g22950.1 173 40.2 58.2

LJGI gnl|LJGI|TC57955 1251 98.9 98.9 weakly similar to UniRef100_A8JFD4 Cluster: Glyoxal or galactose oxidase; n=1; Chlamydomonas reinhardtii|Rep: Glyoxal or galactose oxidase - Chlamydomonas reinhardtii, partial (3%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj2g3v0178230.1 length: 254 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 126-145

Wolf-PSORT

Lj2g3v0178230.1 chlo 11, cyto 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj2g3v0178230.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3T6J6_LOTJA	424	83.9	83.9	(tr\|I3T6J6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT2G43630.1	103	32.6	49.6	\| Symbols: \| FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, nucleus, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G59640.2); Has 67 Blast hits to 67 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 1; Plants - 49; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink). \| chr2:18096255-18097344 FORWARD LENGTH=274
Medicago	Medtr6g012760.1	193	43.8	55.1	\| transmembrane protein, putative \| HC \| chr6:3957866-3956581 \| 20130731
Soybean	Glyma07g22950.1	173	40.2	58.2
LJGI	gnl\|LJGI\|TC57955	1251	98.9	98.9	weakly similar to UniRef100_A8JFD4 Cluster: Glyoxal or galactose oxidase; n=1; Chlamydomonas reinhardtii\|Rep: Glyoxal or galactose oxidase - Chlamydomonas reinhardtii, partial (3%)

no_ID
Lj2g3v0178230.1				length: 254 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	126-145