Miyakogusa Predicted Gene
- Lj2g3v0093580.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7L911_MEDTR |
73.6 |
53.9 |
68.4 |
(tr|G7L911) B3 domain-containing protein OS=Medicago truncatula GN=MTR_8g103940 PE=4 SV=1 |
| TAIR_pep |
AT4G33280.1 |
48.9 |
46.8 |
61.7 |
| Symbols: | AP2/B3-like transcriptional factor family protein | chr4:16047357-16049310 REVERSE LENGTH=337 |
| Medicago |
Medtr8g103940.1 |
73.6 |
53.9 |
68.4 |
| transcriptional factor B3 family protein | LC | chr8:43749832-43752569 | 20130731 |
| Soybean |
Glyma09g20060.1 |
58.5 |
55.3 |
74.5 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v0093580.1 |
length: 95 aa. |
| IPR003340 |
B3 DNA binding domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003677 |
DNA binding |
|
|
| Biological Process |
GO:0006355 |
regulation of transcription, DNA-dependent |
|
|
| HMMPfam |
PF02362 |
B3 |
2.7e-12 |
2-51 |
| ProfileScan |
PS50863 |
B3 |
13.126 |
1-59 |
| IPR015300 |
DNA-binding pseudobarrel domain |
| Gene3D |
G3DSA:2.40.330.10 |
no description |
6.4e-13 |
2-51 |
| superfamily |
SSF101936 |
DNA-binding |
8.2e-12 |
1-52 |
- Wolf-PSORT
Lj2g3v0093580.1 mito 7, cyto 3.5, chlo_mito 3.5, cyto_mito 3.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v0093580.1 |
|