Miyakogusa Predicted Gene

Lj2g3v0092560.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7LDC5_SOYBN 257 47.1 61.3 (tr|K7LDC5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G18990.1 104 28.1 45.2 | Symbols: VRN1, REM39 | AP2/B3-like transcriptional factor family protein | chr3:6549077-6551568 REVERSE LENGTH=341
Medicago Medtr1g035460.1 268 50.2 64.7 | plant-specific B3-DNA-binding domain protein | LC | chr1:12873695-12875594 | 20130731
Soybean Glyma09g18790.1 255 46.4 63.5  
LJGI gnl|LJGI|DC596542 214 89.4 89.4 weakly similar to UniRef100_A2Q2N6 Cluster: Transcriptional factor B3; n=1; Medicago truncatula|Rep: Transcriptional factor B3 - Medicago truncatula (Barrel medic), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0092560.1 length: 391 aa.
IPR003340 B3 DNA binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 1.9e-15 199-283
HMMSmart SM01019 B3 2.9e-14 199-289
ProfileScan PS50863 B3 13.592 1-65
198-289
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 6.6e-22 4-64
194-286
superfamily SSF101936 DNA-binding 3e-10 193-295
1-73
no_ID  
Seg seg seg NA 351-368
Wolf-PSORT
Lj2g3v0092560.1	nucl 5, cyto 2, vacu 2, golg 2, chlo 1, mito 1, E.R. 1, chlo_mito 1, golg_plas 1, cyto_pero 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0092560.1