Miyakogusa Predicted Gene

Lj2g3v0044780.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1ND23_SOYBN 572 78.4 85.7 (tr|I1ND23) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G18990.1 247 45.8 57.3 | Symbols: VRN1, REM39 | AP2/B3-like transcriptional factor family protein | chr3:6549077-6551568 REVERSE LENGTH=341
Medicago Medtr1g034240.1 520 72.8 81.7 | B3 domain transcription factor VRN1-like protein | HC | chr1:12442470-12446398 | 20130731
Soybean Glyma20g01130.1 572 78.4 85.7  
LJGI gnl|LJGI|TC74089 2087 99.7 99.7 similar to UniRef100_Q6R2U8 Cluster: Reduced vernalization response 1; n=1; Brassica rapa|Rep: Reduced vernalization response 1 - Brassica campestris (Field mustard), partial (43%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0044780.1 length: 355 aa.
IPR003340 B3 DNA binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 1.1e-15 223-313
HMMSmart SM01019 B3 8.2e-19 220-315
ProfileScan PS50863 B3 13.930 220-315
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 3e-23 212-314
superfamily SSF101936 DNA-binding 4.6e-24 212-316
no_ID  
Seg seg seg NA 172-182
Wolf-PSORT
Lj2g3v0044780.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0044780.1