Miyakogusa Predicted Gene
- Lj2g3v0039060.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JLH4_MEDTR |
236 |
68.0 |
74.7 |
(tr|G7JLH4) Xyloglucan 6-xylosyltransferase OS=Medicago truncatula GN=MTR_4g119880 PE=4 SV=1 |
| TAIR_pep |
AT3G62720.2 |
196 |
56.8 |
67.0 |
| Symbols: ATXT1, XT1, XXT1 | xylosyltransferase 1 | chr3:23201326-23202708 FORWARD LENGTH=460 |
| Medicago |
Medtr4g119880.1 |
236 |
68.0 |
74.7 |
| xyloglucan xylosyltransferase | HC | chr4:49678173-49680110 | 20130731 |
| Soybean |
Glyma15g15820.1 |
219 |
63.3 |
73.4 |
|
| LJGI |
gnl|LJGI|TC74088 |
385 |
91.8 |
91.8 |
similar to UniRef100_A7NW49 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v0039060.1 |
length: 235 aa. |
| IPR008630 |
Galactosyl transferase |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| Molecular Function |
GO:0016758 |
transferase activity, transferring hexosyl groups |
|
|
| HMMPfam |
PF05637 |
Glyco_transf_34 |
1.2e-06 |
134-170 |
| no_ID |
|
| HMMPanther |
PTHR31311 |
FAMILY |
1.9e-30 |
50-169 |
| Seg |
seg |
seg |
NA |
7-21 |
- Wolf-PSORT
Lj2g3v0039060.1 mito 5.5, cyto_mito 3.5, chlo 2, vacu 2, nucl 1, plas 1, extr 1, E.R. 1, nucl_plas 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v0039060.1 |
|