Miyakogusa Predicted Gene

Lj1g3v5062690.3

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1JS71_SOYBN 692 65.0 74.6 (tr|I1JS71) Uncharacterized protein OS=Glycine max PE=4 SV=2

TAIR_pep AT1G53800.1 379 43.6 59.4 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53250.1); Has 1136 Blast hits to 882 proteins in 242 species: Archae - 2; Bacteria - 216; Metazoa - 257; Fungi - 77; Plants - 87; Viruses - 4; Other Eukaryotes - 493 (source: NCBI BLink). | chr1:20081888-20084320 FORWARD LENGTH=568

Medicago Medtr7g117530.1 634 61.2 71.5 | NUMOD3 motif protein | HC | chr7:48689940-48685784 | 20130731

Soybean Glyma19g45150.1 663 64.0 72.7

LJGI gnl|LJGI|TC81926 1316 99.4 99.4 similar to UniRef100_A7P6A2 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v5062690.3 length: 551 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 354-375

Seg seg seg NA 353-375

Wolf-PSORT

Lj1g3v5062690.3 cyto 8, nucl 6

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v5062690.3

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1JS71_SOYBN	692	65.0	74.6	(tr\|I1JS71) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep	AT1G53800.1	379	43.6	59.4	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53250.1); Has 1136 Blast hits to 882 proteins in 242 species: Archae - 2; Bacteria - 216; Metazoa - 257; Fungi - 77; Plants - 87; Viruses - 4; Other Eukaryotes - 493 (source: NCBI BLink). \| chr1:20081888-20084320 FORWARD LENGTH=568
Medicago	Medtr7g117530.1	634	61.2	71.5	\| NUMOD3 motif protein \| HC \| chr7:48689940-48685784 \| 20130731
Soybean	Glyma19g45150.1	663	64.0	72.7
LJGI	gnl\|LJGI\|TC81926	1316	99.4	99.4	similar to UniRef100_A7P6A2 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%)

no_ID
Lj1g3v5062690.3				length: 551 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	354-375
Seg	seg	seg	NA	353-375