Miyakogusa Predicted Gene

Lj1g3v5060720.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SDA7_LOTJA 196 71.1 72.5 (tr|I3SDA7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT2G46820.2 148 63.9 71.4 | Symbols: PTAC8, TMP14, PSAP, PSI-P | photosystem I P subunit | chr2:19243729-19244870 FORWARD LENGTH=174

Medicago Medtr7g118290.1 177 57.5 64.4 | thylakoid membrane phosphoprotein 14 kDa protein | HC | chr7:49092785-49094059 | 20130731

Soybean Glyma07g05490.1 185 59.7 68.2

LJGI gnl|LJGI|TC57696 1011 100.0 100.0 similar to UniRef100_A7PXU4 Cluster: Chromosome chr15 scaffold_37, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_37, whole genome shotgun sequence - Vitis vinifera (Grape), partial (90%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v5060720.1 length: 170 aa.

IPR025564 Domain of unknown function DUF4308

method AccNumber shortName E-value location

HMMPfam PF14159 DUF4308 1.2e-26 93-170

no_ID

Seg seg seg NA 3-16
36-50
66-82

Wolf-PSORT

Lj1g3v5060720.1 chlo 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v5060720.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SDA7_LOTJA	196	71.1	72.5	(tr\|I3SDA7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT2G46820.2	148	63.9	71.4	\| Symbols: PTAC8, TMP14, PSAP, PSI-P \| photosystem I P subunit \| chr2:19243729-19244870 FORWARD LENGTH=174
Medicago	Medtr7g118290.1	177	57.5	64.4	\| thylakoid membrane phosphoprotein 14 kDa protein \| HC \| chr7:49092785-49094059 \| 20130731
Soybean	Glyma07g05490.1	185	59.7	68.2
LJGI	gnl\|LJGI\|TC57696	1011	100.0	100.0	similar to UniRef100_A7PXU4 Cluster: Chromosome chr15 scaffold_37, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr15 scaffold_37, whole genome shotgun sequence - Vitis vinifera (Grape), partial (90%)

IPR025564	Domain of unknown function DUF4308
Lj1g3v5060720.1				length: 170 aa.
method	AccNumber	shortName	E-value	location
HMMPfam	PF14159	DUF4308	1.2e-26	93-170
no_ID
Seg	seg	seg	NA	3-16 36-50 66-82