Miyakogusa Predicted Gene
- Lj1g3v5060670.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
Q2HTB8_MEDTR |
317 |
68.1 |
79.1 |
(tr|Q2HTB8) Harpin-induced 1 OS=Medicago truncatula GN=MTR_7g118270 PE=4 SV=1 |
| TAIR_pep |
AT4G01410.1 |
201 |
52.9 |
72.2 |
| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr4:578308-578991 FORWARD LENGTH=227 |
| Medicago |
Medtr7g118270.1 |
317 |
68.1 |
79.1 |
| late embryogenesis abundant protein | HC | chr7:49087219-49088602 | 20130731 |
| Soybean |
Glyma19g44980.1 |
306 |
75.4 |
89.3 |
|
| LJGI |
gnl|LJGI|TC58562 |
1269 |
97.3 |
97.3 |
similar to UniRef100_Q2HTB8 Cluster: Harpin-induced 1; n=1; Medicago truncatula|Rep: Harpin-induced 1 - Medicago truncatula (Barrel medic), partial (80%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v5060670.1 |
length: 231 aa. |
| IPR004864 |
Late embryogenesis abundant protein, LEA-14 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03168 |
LEA_2 |
4.4e-12 |
102-205 |
| no_ID |
|
| HMMPanther |
PTHR31415 |
FAMILY |
4.7e-38 |
46-231 |
| HMMPanther |
PTHR31415:SF0 |
SUBFAMILY |
4.7e-38 |
46-231 |
| Seg |
seg |
seg |
NA |
31-44 |
- Wolf-PSORT
Lj1g3v5060670.1 chlo 3, vacu 3, E.R. 3, E.R._vacu 3, cyto 2, chlo_mito 2, E.R._plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v5060670.1 |
|